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Transactions of the Royal Society of Tropical Medicine and Hygiene
Volume 96
, Pages S15-S20
, April 2002
DNA thermodynamic pressure: a potential contributor to genome evolution
References
- . Trypanosomatidae codon usage and GC distribution. Memórias do Instituto Oswaldo Cruz. 1992;87:517–523
- . Evolution of codon usage and base contents in kinetoplastid protozoans. Molecular Biology and Evolution. 1994;11:790–802
- . Diversity in G + C content at the third position of codons in vertebrate genes and its cause. Nucleic Acids Research. 1986;14:6345–6355
- . The isochore organization of the human genome. Annual Review of Genetics. 1989;23:637–661
- . Compositional constraints and genome evolution. Journal of Molecular Biology. 1986;24:1–11
-
.
The mosaic genome of warm-blooded vertebrates.
Science. 1985;28:953–957
- . The effect of context on synonymous codon usage with low codon usage bias. Nucleic Acids Research. 1990;18:2869–2873
- . Codon usage is imposed by the gene location in the transcript unit. Current Genetics. 1991;20:353–358
-
.
A nonhyperther-mophilic common ancestor to extant life forms.
Science. 1999;283:1–2
- . Codon frequencies in 119 individual genes confirm consistent choices of degenerate bases according to genome type. Nucleic Acids Research. 1980;8:1893–1913
- . Codon catalog usage and the genome hypothesis. Nucleic Acids Research. 1980;8:r49–r61
- . Correlation between the abundance of Escherichia coli transfer RNAs and the occurrence of the respective codons in its protein genes: a proposal for a synonymous codon choice that is optimal for the E. coli translational system. Journal of Molecular Biology. 1981;151:389–409
- . Correlation between the abundance of yeast transfer RNAs and the occurrence of the respective codons in protein genes. Journal of Molecular Biology. 1982;158:573–597
- . Variation in G + C-content and the codon choice: differences among synonymous codon groups in vertebrate genes. Nucleic Acids Research. 1989;17:6181–6189
- . Evolution of RNA editing in kinetoplastid protozoa. Nature. 1994;368:345–348
-
.
General nearest neighbour prefences in G/C oligomers interrupted by A/T: correlation with DNA structure.
Journal of Biomolecular Structure and Dynamics. 1990;8:399–411
-
.
In:
Fundamentals of Statistical and Thermal Physics. New York: McGraw Hill; 1965;
- . Trypanosoma cruzi: impact of clonal evolution of the parasite on its biological and medical properties. Experimental Parasitology. 1998;89:30–39
- . A thermodynamic theory of codon bias in viral genes. Journal of Theoretical Biology. 1983;101:171–203
- . Was adenine the first purine?. Science. 1989;245:1102–1104
-
.
The effect of electric field on the electronic structure of DNA. Calculation of the polarizability and of the permanent dipole moment for the nucleotide bases and the base pairs.
International Journal of Quantum Chemistry. 1969;3:621–634
- . Codon usage in yeast: cluster analysis clearly differentiates highly and lowly expressed genes. Nucleic Acids Research. 1986;14:5125–5143
-
.
Directional mutation pressure and neutral molecular evolution.
In:
Proceedings of the National Academy of Sciences of the USA. 85:1988;p. 2653–2657
PII: S0035-9203(02)90046-5
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Transactions of the Royal Society of Tropical Medicine and Hygiene
Volume 96
, Pages S15-S20
, April 2002
